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Snapshot of Immune System Proteins Predicts Patients’ Response to Immunotherapy

Checkpoint therapy blocking PD-1, a cellular surface marker that dampens the immune response, has revolutionized cancer care, enhancing overall survival in 33 to 40 percent of melanoma patients. However, it does not work in most patients and can have adverse effects and considerable costs to the health care system. Thus, it is crucial to identify patients likely to benefit from blocking PD-1 before administering therapy. MUSC Hollings Cancer Center researcher Carsten Krieg, Ph.D., an assistant professor in the MUSC Department of Microbiology and Immunology and the Department of Dermatology, and colleagues are using a novel technology to answer that question.

The technology, single-cell mass cytometry (called “Helios”), allows Krieg to generate an ‘Instagram’ of a patient’s immune system to identify the molecular details of the immune cells. An article report- ing these results was featured on the cover of the February 2018 Nature Medicine (doi: 10.1038/nm.4466).

To date, researchers have tried to use patient-derived killer T-cells to identify biomarkers; however, this approach is limited by the small sample sizes that can be attained.Krieg and others in the field are starting to widen their approach by collecting peripheral blood mononuclear cells from a simple blood draw, so-called liquid biopsies.

The cells are stained with metal-conjugated antibodies that target surface and intracel- lular proteins. This allows for sensitive detection of more than 30 proteins on a single cell over millions of blood cells. The stained cells are placed in Helios and are ionized. Because the metals placed on each antibody weigh differently, the resulting ions can be separated into different pools. Usingartificial intelligence–guided bioinformaticsand expert-guided analysis, researchers cancreate “immune instagrams,” or simplified visualizations of the blood immune response in a tumor patient.

Using this technology, Krieg and hiscolleagues confirmed that, as intended, T cellsrespond to anti-PD-1 immunotherapy. They showed that the frequency of classical monocytes, a type of immune cell, in the peripheral blood correlated with a patient’s response rate: the more monocytes in the blood, the better the response to anti-PD-1 therapy.

Generating immune profiles enablesclinicians to sort patients towards immuno-therapeutic regimens to which they are most likely to respond, thus supporting precision medicine. Not only will this technology allow clinicians to identify the subset of advanced melanoma patients who will respond positively to anti-PD-1 therapy, it may also identify alternative targets for patients who would not respond. Additionally, since this approach uses a simple blood test, samples could be taken throughout the treatment regimen. This would allow clinicians tomonitor any changes to patients’ profiles that might require changes to their treatment.

“Here at MUSC, we hope to use the technology to help clinicians monitor success in their clinical trials or tell them to switch the immunotherapy,” says Krieg.

Watch an interview with Dr. Krieg

--MATTHEW GRESETH
Progressnotes Summer 2018


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